Software

TURSCA

About Monochromatic scalar 3D radiative transfer model. Described in detail in preprint https://arxiv.org/abs/2503.16037. Creators Antti Mikkonen

DendriteSAM

About This repository contains the code for training the DendriteSAM model, designed for dendritic segmentation in electron microscopy images. Creators

Slurm MRIpipelines

About This repository contains example pipelines to run different T1w-MRI processing tools in an HPC-like environment. These are intended to

LinTim

About LinTim is a scientific software toolbox for public transportation planning that has been under development since 2007. Although the

HAPI2LIBIS

About HAPI2LIBIS enables easy creation of spectral molecular absorption files for the radiative transfer simulator software LibRadtran. Creators Antti Kukkurainen,

OMEGA

About Open-source multi-dimensional tomographic reconstruction software designed for image reconstruction in positron emission tomography, computed tomography, and single photon emission

LeafGen

About LeafGen is a MATLAB package containing methods for generating virtual foliage on 3D tree models based on parametric leaf

MMFS-GA

About Multi-view datasets contain multiple forms of data and are beneficial for prediction models. However, using such data can lead to